Download fasta file .txr

Sorry, something went wrong. Also, I've now re-run my original command "bit-dl-ncbi-assemblies -w list. As you say, it may be that my work network doesn't allow ftp transfer based within a hospital laboratory. Seems to work fine over my home network. I'll try the http-based command when I'm next at work. Ideally, would be great to be able to use your tool at work also. I thought it began downloading but when it finished, says none of the accessions were found? I've manually checked the accessions, and they are definitely searchable on NCBI.

Not sure what's the issue. Sorry to bug you! Sorry, I'm an idiot , please disregard my post above. My accessions are for the Nucleotide database. Would you think it's possible easy for me to modify your code to search accessions against the Nucleotide db? Skip to content. Star New issue. Jump to bottom. Copy link. Hi Mike, Thanks for making this tool - exactly what I'm looking for. Downloading ncbi assembly summaries to be able to construct ftp links Hi there!

Thanks for your prompt reply! You are now following this question You will see updates in your followed content feed. You may receive emails, depending on your communication preferences. How to convert a fasta file to txt file? Show older comments. Ayush Kumar on 6 Jan Vote 0. Edited: Stephen on 6 Jan Answers 1.

Stephen on 6 Jan Cancel Copy to Clipboard. Every example that I found online was a text file. But how to convert it into text file? It is already a text file. The file extension e. You can change the file extension from. See Also. Tags fasta txt. Start Hunting! An Error Occurred Unable to complete the action because of changes made to the page.